[WIP] Implement growth assessment using WHO indicators #80

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joao.dubas wants to merge 76 commits from jpd-feat-add-bmi-module-with-live-view into main
3 changed files with 31 additions and 22 deletions
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@ -23,7 +23,7 @@ defmodule Growth.Calc.Centile do
alias Growth.Calc.ZScore
@spec compute(number(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na | nil
@spec compute(number(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na
@doc """
Compute the centile for a given measurement (`y`) and the Box-Cox values: power (`l`), median (`m`), and
coefficient of variation (`s`).
@ -36,10 +36,6 @@ defmodule Growth.Calc.Centile do
19.0
"""
def compute(nil, _, _, _) do
nil
end
def compute(y, l, m, s) do
zscore = ZScore.raw(y, l, m, s)

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@ -34,7 +34,7 @@ defmodule Growth.Calc.ZScore do
"""
@type s :: number()
@spec compute(number(), l(), m(), s()) :: Growth.measure()
@spec compute(number(), l(), m(), s()) :: number()
@doc """
Compute the adjusted z-score for a given measurement (`y`) and the Box-Cox values: power (`l`), median (`m`), and
coefficient of variation (`s`).
@ -49,11 +49,6 @@ defmodule Growth.Calc.ZScore do
1.4698319520484722
"""
def compute(nil, _, _, _) do
nil
end
def compute(y, l, m, s) do
y
|> raw(l, m, s)

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@ -25,7 +25,7 @@ defmodule Growth.Score.Scorer do
growth
|> lms(indicator)
|> Enum.map(fn {precision, {l, m, s}} ->
{precision, {z_score(indicator, growth, l, m, s), centile(indicator, growth, l, m, s)}}
{precision, scores(indicator, growth, l, m, s)}
end)
%{growth | results: [Map.new([{indicator.measure_name(), result}]) | growth.results]}
@ -58,23 +58,41 @@ defmodule Growth.Score.Scorer do
|> Enum.reject(&is_nil/1)
end
@spec z_score(module(), Growth.t(), ZScore.l(), ZScore.m(), ZScore.s()) :: number()
@spec scores(module(), Growth.t(), ZScore.l(), ZScore.m(), ZScore.s()) ::
{Growth.measure(), number() | :na, nil}
@doc """
Calculate the z-score and centile of an indicator measurement.
"""
def scores(indicator, growth, l, m, s) do
measure = Map.get(growth, indicator.measure_name())
{
z_score(measure, l, m, s),
centile(measure, l, m, s)
}
end
@spec z_score(Growth.measure(), ZScore.l(), ZScore.m(), ZScore.s()) :: Growth.measure()
@doc """
Check `Growth.Calc.ZScore.compute/4`.
"""
def z_score(indicator, growth, l, m, s) do
growth
|> Map.get(indicator.measure_name())
|> ZScore.compute(l, m, s)
def z_score(nil, _, _, _) do
nil
end
@spec centile(module(), Growth.t(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na
def z_score(value, l, m, s) do
ZScore.compute(value, l, m, s)
end
@spec centile(Growth.measure(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na | nil
@doc """
Check `Growth.Calc.Centile.compute/4`.
"""
def centile(indicator, growth, l, m, s) do
growth
|> Map.get(indicator.measure_name())
|> Centile.compute(l, m, s)
def centile(nil, _, _, _) do
nil
end
def centile(value, l, m, s) do
Centile.compute(value, l, m, s)
end
end