[WIP] Implement growth assessment using WHO indicators #80
@ -23,7 +23,7 @@ defmodule Growth.Calc.Centile do
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alias Growth.Calc.ZScore
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@spec compute(number(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na | nil
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@spec compute(number(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na
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@doc """
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Compute the centile for a given measurement (`y`) and the Box-Cox values: power (`l`), median (`m`), and
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coefficient of variation (`s`).
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@ -36,10 +36,6 @@ defmodule Growth.Calc.Centile do
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19.0
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"""
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def compute(nil, _, _, _) do
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nil
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end
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def compute(y, l, m, s) do
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zscore = ZScore.raw(y, l, m, s)
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@ -34,7 +34,7 @@ defmodule Growth.Calc.ZScore do
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"""
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@type s :: number()
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@spec compute(number(), l(), m(), s()) :: Growth.measure()
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@spec compute(number(), l(), m(), s()) :: number()
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@doc """
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Compute the adjusted z-score for a given measurement (`y`) and the Box-Cox values: power (`l`), median (`m`), and
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coefficient of variation (`s`).
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@ -49,11 +49,6 @@ defmodule Growth.Calc.ZScore do
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1.4698319520484722
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"""
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def compute(nil, _, _, _) do
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nil
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end
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def compute(y, l, m, s) do
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y
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|> raw(l, m, s)
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@ -25,7 +25,7 @@ defmodule Growth.Score.Scorer do
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growth
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|> lms(indicator)
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|> Enum.map(fn {precision, {l, m, s}} ->
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{precision, {z_score(indicator, growth, l, m, s), centile(indicator, growth, l, m, s)}}
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{precision, scores(indicator, growth, l, m, s)}
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end)
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%{growth | results: [Map.new([{indicator.measure_name(), result}]) | growth.results]}
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@ -58,23 +58,41 @@ defmodule Growth.Score.Scorer do
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|> Enum.reject(&is_nil/1)
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end
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@spec z_score(module(), Growth.t(), ZScore.l(), ZScore.m(), ZScore.s()) :: number()
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@spec scores(module(), Growth.t(), ZScore.l(), ZScore.m(), ZScore.s()) ::
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{Growth.measure(), number() | :na, nil}
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@doc """
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Calculate the z-score and centile of an indicator measurement.
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"""
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def scores(indicator, growth, l, m, s) do
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measure = Map.get(growth, indicator.measure_name())
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{
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z_score(measure, l, m, s),
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centile(measure, l, m, s)
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}
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end
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@spec z_score(Growth.measure(), ZScore.l(), ZScore.m(), ZScore.s()) :: Growth.measure()
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@doc """
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Check `Growth.Calc.ZScore.compute/4`.
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"""
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def z_score(indicator, growth, l, m, s) do
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growth
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|> Map.get(indicator.measure_name())
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|> ZScore.compute(l, m, s)
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def z_score(nil, _, _, _) do
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nil
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end
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@spec centile(module(), Growth.t(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na
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def z_score(value, l, m, s) do
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ZScore.compute(value, l, m, s)
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end
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@spec centile(Growth.measure(), ZScore.l(), ZScore.m(), ZScore.s()) :: number() | :na | nil
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@doc """
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Check `Growth.Calc.Centile.compute/4`.
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"""
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def centile(indicator, growth, l, m, s) do
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growth
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|> Map.get(indicator.measure_name())
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|> Centile.compute(l, m, s)
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def centile(nil, _, _, _) do
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nil
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end
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def centile(value, l, m, s) do
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Centile.compute(value, l, m, s)
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end
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end
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